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Data to Action: Increasing the Use and Value of Earth Science Data and InformationFor 20 years, ESIP meetings have brought together the most innovative thinkers and leaders around Earth observation data, thus forming a community dedicated to making Earth observations more discoverable, accessible and useful to researchers, practitioners, policymakers, and the public.

The ESIP Summer Meeting has already taken place, but check out the ESIP Summer Meeting Highlights Webinar: https://youtu.be/vbA8CuQz9Rk.
Wednesday, July 17
 

1:30pm PDT

Getting Stuff Done with R, Python and Jupyter Notebooks
Sometimes the hardest part of getting started with coding is to determine which is the best software to learn or use! The goal of this session is to provide a basic introduction to three commonly-used tools for data management and analysis and to provide examples of how they can be used for managing data, visualization, exploiting cloud resources, generating metadata, using or creating web services, manipulating XML documents, and facilitating reorganization of data.

A panel will provide brief overviews of R, Python, and Jupyter Notebooks, including examples of what they do best, drawn from real-world applications. Workshop attendees will be encouraged to participate in discussions of data challenges they have encountered and the relative merits of the different tools in meeting them. Participation in the session by coders experienced in one or more of the tools is encouraged, as is participation by those who have yet to use any of these very powerful tools.

NOTES: bit.ly/put_notes_here

Session recording is here.


Presenter: Colin Smith
Presentation Title: Getting Things Done with R
Slides: https://doi.org/10.6084/m9.figshare.9450371

Presenter: John Porter
Presentation Title: Introduction to Python
Slides:https://doi.org/10.6084/m9.figshare.9450617

Presenter: Stace Beaulieu
Presentation Title: How we are using Jupyter Notebooks in the Northeast U.S. Shelf (NES) LTER
Slides: https://doi.org/10.6084/m9.figshare.9450875

Session Take-Aways
  1. Python is more widely used than R.
  2. The visualization features incorporated into Jupyter Notebooks are really valuable for scientists and outside users.
  3. Trying to run R through Jupyter Notebooks can be a challenge but potentially the Jupyter Lab approach could help.


Speakers
avatar for Stace Beaulieu

Stace Beaulieu

ESIP rep for WHOI, Woods Hole Oceanographic Institution
I'm the Information Manager for the Northeast U.S. Shelf LTER (https://nes-lter.whoi.edu/) and Coordinator for WHOI's Ocean Informatics Working Group (https://www.whoi.edu/ocean-informatics). Come talk with me about data science training in the ocean sciences!
avatar for Colin Smith

Colin Smith

Data manager, Environmental Data Initiative (EDI)
I work on accelerating the archive and reuse of data in ecological science. My interests are in software development and data harmonization.
CT

Chris Turner

Data Librarian, Axiom Data Science
avatar for M. Gastil-Buhl

M. Gastil-Buhl

Information Manager, Moorea Coral Reef Long Term Ecological Research
I curate datasets for an LTER site for reuse in future and current use by other research groups. I am interested in optimizing data usability and making the curation process more efficient. My favorite part of this work is the collegial spirit among LTER site information managers... Read More →


Wednesday July 17, 2019 1:30pm - 3:00pm PDT
Ballrm BC
  Ballrm BC, Panel
  • Area R, Python, Jupyter Notebooks
  • REMOTE PARTICIPATION LINK: https://global.gotomeeting.com/join/670434781
  • REMOTE PARTICIPATION PHONE #: United States: +1 (646) 749-3129 Australia: +61 2 8355 1050 France: +33 170 950 594 Norway: +47 21 93 37 51 Austria: +43 7 2081 5427 Germany: +49 692 5736 7317 Spain: +34 932 75 2004 Belgium: +32 28 93 7018 Ireland: +353 15 360 728 Sweden: +46 853 527 827 Canada: +1 (647) 497-9391 Italy: +39 0 230 57 81 42 Switzerland: +41 225 4599 78 Denmark: +45 32 72 03 82 Netherlands: +31 207 941 377 United Kingdom: +44 330 221 Finland: +358 923 17 0568 New Zealand: +64 9 280 6302 0088
  • REMOTE PARTICIPATION ACCESS CODE 670-434-781
 
Friday, July 19
 

10:00am PDT

Preparing climate and hydrological time series data for submission to CUAHSI
In this working session we will introduce CUAHSI Data services to manage point time series data, such as streamflow and precipitation. This standardized data format will enable data synthesis and comparison across different sites and locations. Specifically, we will demonstrate how to convert a climate dataset into this format and upload to CUAHSI’s data repository. Participants may follow along using their own data. Please bring one year’s worth of climate station data in your local format to this working session along with a laptop containing your favorite scripting environment. We will also provide an example dataset and expertise in various scripting languages. The goal is for a data manager to obtain a good understanding of the workflow involved for converting their local climate station data for submission to CUAHSI’s data repository.

Session recording here.

Moderators
Speakers
avatar for Margaret O'Brien

Margaret O'Brien

Data Specialist, University of California
My academic background is in biological oceanography. Today, I am a data specialist working with the Environmental Data Initiative (EDI) plus ecosystem-level projects conducting primary research, like the LTER network, and a marine Biodiversity Observation Network. My primary data... Read More →
avatar for Suzanne Remillard

Suzanne Remillard

Andrews Forest LTER Information Manager, Oregon State University


Friday July 19, 2019 10:00am - 11:30am PDT
Room 316
  Room 316, Working Session
 


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